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metagenome-host-removal
Remove host-derived reads from metagenomic samples by aligning to a host reference genome and extracting unmapped pairs.
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Skill Directory
AI Skill Directory
Browse curated skills with source links, package snapshots, README assets and install signals in one calm, searchable catalog.
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miwrite-data
Local-only qualitative analysis for interviews, field notes, focus groups, and mixed text material.
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nextflow-development
Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on…
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numerical-integration
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ontology-explorer
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rct-bias-assessment-rob2
Automates Risk of Bias 2 (ROB2) assessment for RCT papers by analyzing text against specific domains and synthesizing a report. Use when you need to assess the quality of a clinical trial paper or eva…
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novelty-assessment
Index entry for an upstream research Skill intended for research work involving novelty assessment. Maintained upstream by lingzhi227; source files are not included in this package.
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oer-overpotential
Index entry for an upstream research Skill intended for research work involving oer overpotential. Maintained upstream by Hello-QM; source files are not included in this package.
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metagenome-taxonomic-profiling
Profile microbial community composition from shotgun metagenomic reads using Kraken2/Bracken or MetaPhlAn 4.
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nanogpt
Educational GPT implementation in ~300 lines. Reproduces GPT-2 (124M) on OpenWebText. Clean, hackable code for learning transformers. By Andrej Karpathy. Perfect for understanding GPT architecture fro…
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ngs-quality-control
Raw read quality assessment with FastQC and multi-sample report aggregation with MultiQC.
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numerical-methods
Numerical algorithms and computational techniques for statistics
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openfold3
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nianan-scientificfig-skills
Index entry for an upstream research Skill intended for research work involving nianan scientificfig skills. Maintained upstream by NIANANRUO; source files are not included in this package.
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novelty-check
Index entry for an upstream research Skill intended for research work involving novelty check. Maintained upstream by wanshuiyin; source files are not included in this package.
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open-targets-search
Index entry for an upstream research Skill intended for searching for research information or scholarly resources. Maintained upstream by yorkeccak; source files are not included in this package.
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methods-section-writer
Turns your protocol and analysis workflow into publication-ready Methods text. Use when writing or revising the Methods section of a biomedical manuscript, ensuring it complies with reporting guidelin…
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ncbi-eutilities-assistant
Query NCBI Entrez databases through official E-utilities with deterministic search, summary, fetch, link, and history workflows.
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nonlinear-solvers
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numerical-stability
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parameter-optimization
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notes-to-paper-section
Index entry for an upstream research Skill intended for research work involving notes to paper section. Maintained upstream by HuiyuanXie; source files are not included in this package.
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nrr-overpotential
Index entry for an upstream research Skill intended for research work involving nrr overpotential. Maintained upstream by Hello-QM; source files are not included in this package.
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openalex
Index entry for an upstream research Skill intended for research work involving openalex. Maintained upstream by wanshuiyin; source files are not included in this package.
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