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Condenses a full study into conference-submission abstract format. Use when adapting a manuscript abstract or study summary to meet a specific conference's word limit, structured format (Background/Me…
Analyzes clinical diagnostic accuracy studies for bias using the QUADAS-2 tool. Use when Claude needs to assess the quality, risk of bias, or applicability of diagnostic accuracy studies (e.g., "Asses…
Writes complete, publication-grade figure legends that can stand on their own. Use when writing or revising figure legends for any scientific figure — bar charts, line graphs, scatter plots, box plots…
Critically annotate technical papers with inline comments about mathematical gaps, unjustified steps, risky assumptions, and verified results. Use when Codex needs to leave compile-safe review comment…
Use when the empirical core of a 《数量经济技术经济研究》 (JQTE) manuscript is an econometric model — time series, cointegration, mixed-frequency, VAR/SVAR, state-space, or panel / macro-econometrics. Enforces co…
This skill should be used when working with LaminDB, an open-source data framework for biology that makes data queryable, traceable, reproducible, and FAIR. Use when managing biological datasets (scRN…
Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design,…
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Use when identifying stable sample subtypes from bulk expression matrices with ConsensusClusterPlus, including PAC-based model selection and consensus matrix/CDF visualization. NOT for: differential e…
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Publication-grade figure correctness and legibility rules. Load before drawing any plot and call `apply_figure_style()` — sets a role-mapped font-size ladder, outward ticks, frameless legends, and 300…
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Use to judge whether a manuscript fits 《数量经济技术经济研究》 (JQTE) and to decide how to frame its contribution — measurement, forecasting, or method-application versus clean causal inference — before investin…
Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy serverless workflows, LatchFile/LatchDir, Nextflow/Snakemake integration.
Compare a project's LaTeX preamble and conventions against the canonical working-paper template. Use when diagnosing template drift without converting venue formats or editing prose.
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Decision-grade enzyme/protein mutation design for thermostability with bioactivity-preserving constraints enforced by default, plus structure-aware and consensus-ranking workflows.
Compose one publication-grade multi-panel figure. Entry from a one-line claim + data files, OR from an existing figure via `derive_outline_prompt` (you read the PNG). Runs a per-figure loop: outline (…
Use when normalizing bulk gene or protein expression matrices with log2 transform, z-score standardization, or min-max scaling before downstream visualization or exploratory analysis. NOT for count-mo…
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Compile one specified LaTeX document, resolve build errors, audit citations, and report build quality. Use when a .tex source must be built or a concrete compilation failure repaired. Not for corpus-w…
Method×Setting matrices and systematic gap identification
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