Skill Directory

AI Skill Directory

Browse curated skills with source links, package snapshots, README assets and install signals in one calm, searchable catalog.

personTashanworldAPI key: unconfirmed

claim-strength-calibrator

Calibrates manuscript claim strength so wording matches the actual evidence level, study design, and validation status.

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personTashanworldAPI key: unconfirmed

datadog-cli

Datadog CLI for searching logs, querying metrics, tracing requests, and managing dashboards. Use this when debugging production issues or working with Datadog observability.

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personTashanworldAPI key: unconfirmed

deg-screening-analysis

Use when screening differentially expressed genes from a bulk expression matrix between two user-specified groups, producing DEG tables, a volcano plot, and a clustered heatmap. Triggers include DEG a…

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personTashanworldAPI key: unconfirmed

download-geo

Download supplementary data files, series matrices, and raw FASTQ links from NCBI GEO for a given GSE series or GSM sample accession.

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personTashanworldAPI key: unconfirmed

external-model-validation

Use when validating an existing prognostic risk signature on an external bulk expression cohort with survival outcomes, producing risk scores, Kaplan-Meier curves, risk distribution plots, heatmap, an…

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personTashanworldAPI key: unconfirmed

compute-env-setup

Set up a compute environment on a remote provider so Claude Science jobs can run there. Covers direct SSH/conda hosts, Slurm clusters, container-via-bridge runners, and managed-API providers (Modal, G…

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personTashanworldAPI key: unconfirmed

cover-letter-drafter

Drafts journal-ready cover letters for manuscript submission. Use when preparing a submission package, communicating the manuscript's contributions and journal fit to editors, or tailoring the novelty…

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personTashanworldAPI key: unconfirmed

decision-curve-analysis

Use when evaluating the clinical utility of a binary prediction model from a single clinical CSV file by fitting a logistic decision-curve model, plotting decision and clinical-impact curves, and expo…

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personTashanworldAPI key: unconfirmed

diagnostic-study-quality-assessment-quadas

Analyzes clinical diagnostic accuracy studies for bias using the QUADAS-2 tool. Use when Claude needs to assess the quality, risk of bias, or applicability of diagnostic accuracy studies (e.g., \"Asse…

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personTashanworldAPI key: unconfirmed

discussion-composer

Composes a Discussion around key findings, mechanisms, clinical relevance, and limitations. Use when writing or improving a Discussion section for any biomedical manuscript — including interpreting re…

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personTashanworldAPI key: unconfirmed

download-sra

Download raw sequencing data from NCBI SRA as FASTQ files using prefetch and fasterq-dump, with support for single accessions, batch lists, and BioProject expansion.

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personTashanworldAPI key: unconfirmed

estimate-immune-score-analysis

Use this skill to compute ESTIMATE immune-related microenvironment scores from a bulk expression matrix, generate an ESTIMATE score heatmap, and optionally generate group-wise ESTIMATE score boxplots …

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personTashanworldAPI key: unconfirmed

consistency-checker-across-manuscript

Checks consistency across title, abstract, methods, results, figures, tables, and supplements to identify internal contradictions and version drift in biomedical manuscripts.

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personTashanworldAPI key: unconfirmed

customize

Create, configure, and maintain custom agent profiles and author new skills via the `repl` tool. Use when the user wants to create an agent profile, build a custom agent, modify agent capabilities, at…

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personTashanworldAPI key: unconfirmed

decision-tree-analysis

Use when building a decision tree model in R and generating feature importance ranking outputs. Supports classification and regression, automatic task detection, parameter validation, model evaluation…

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personTashanworldAPI key: unconfirmed

differential-expression-analysis

Use when analyzing bulk RNA-seq or microarray expression data to identify differentially expressed genes between two biological groups (case vs control), with volcano plots and heatmap visualization. …

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personTashanworldAPI key: unconfirmed

download-gdc

Download files from the NCI Genomic Data Commons (GDC) using the GDC Data Transfer Tool and REST API, supporting both open-access and controlled-access data.

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personTashanworldAPI key: unconfirmed

elastic-net-feature-selection

Use when selecting predictive genes or other molecular features from bulk expression matrices for binary case-vs-control classification with elastic net logistic regression, including coefficient path…

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