pysam
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
Browse curated skills with source links, package snapshots, README assets and install signals in one calm, searchable catalog.
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
Adds PyTorch FSDP2 (fully_shard) to training scripts with correct init, sharding, mixed precision/offload config, and distributed checkpointing. Use when models exceed single-GPU memory or when you ne…
Quantizes LLMs to 8-bit or 4-bit for 50-75% memory reduction with minimal accuracy loss. Use when GPU memory is limited, need to fit larger models, or want faster inference. Supports INT8, NF4, FP4 fo…
Scalable data processing for ML workloads. Streaming execution across CPU/GPU, supports Parquet/CSV/JSON/images. Integrates with Ray Train, PyTorch, TensorFlow. Scales from single machine to 100s of n…
End-to-end paper reproduction from arxiv URL through smoke runs to replication experiments. Handles missing or partial official code, missing training scripts, missing hyperparameters, and private dat…
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Index entry for an upstream research Skill intended for research work involving feishu notify. Maintained upstream by wanshuiyin; source files are not included in this package.
Therapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits, molecular oracles, for therapeutic ML and pharmacological prediction.
High-level PyTorch framework with Trainer class, automatic distributed training (DDP/FSDP/DeepSpeed), callbacks system, and minimal boilerplate. Scales from laptop to supercomputer with same code. Use…
Generate a Reveal.js HTML presentation from Markdown. Use when the user asks to generate a Reveal.js HTML presentation from Markdown.
Distributed training orchestration across clusters. Scales PyTorch/TensorFlow/HuggingFace from laptop to 1000s of nodes. Built-in hyperparameter tuning with Ray Tune, fault tolerance, elastic scaling.…
初始化内容创作系统:检查软件依赖是否装齐 + 建好全部目录结构。用户说"初始化内容系统""搭建工作区""建好文件夹""我的文件夹不全""缺什么软件"时使用。依赖缺的给安装命令并按国内镜像帮装,目录建在 AI第二大脑 下,每个目录附一份用途说明 README。
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Index entry for an upstream research Skill intended for research work involving meta apply. Maintained upstream by wanshuiyin; source files are not included in this package.
Expert guidance for Fully Sharded Data Parallel training with PyTorch FSDP - parameter sharding, mixed precision, CPU offloading, FSDP2
Provides guidance for performing causal interventions on PyTorch models using pyvene's declarative intervention framework. Use when conducting causal tracing, activation patching, interchange interven…
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Arbitrate conflicting reports into a source-grounded claim audit and reconciled synthesis.
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Index entry for an upstream research Skill intended for research analysis related to the named method or subject. Maintained upstream by ptreezh; source files are not included in this package.
Index entry for an upstream research Skill intended for research work involving meta optimize. Maintained upstream by wanshuiyin; source files are not included in this package.