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chai1
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Skill Directory
AI Skill Directory
Browse curated skills with source links, package snapshots, README assets and install signals in one calm, searchable catalog.
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cites-review
Review, organize, and format academic references and citations following GB/T 7714-2015 and other standards. This skill should be used when users need to: (1) Check and fix reference formatting errors…
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consistency-checker-across-manuscript
Checks consistency across title, abstract, methods, results, figures, tables, and supplements to identify internal contradictions and version drift in biomedical manuscripts.
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customize
Create, configure, and maintain custom agent profiles and author new skills via the `repl` tool. Use when the user wants to create an agent profile, build a custom agent, modify agent capabilities, at…
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decision-tree-analysis
Use when building a decision tree model in R and generating feature importance ranking outputs. Supports classification and regression, automatic task detection, parameter validation, model evaluation…
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differential-expression-analysis
Use when analyzing bulk RNA-seq or microarray expression data to identify differentially expressed genes between two biological groups (case vs control), with volcano plots and heatmap visualization. …
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download-gdc
Download files from the NCI Genomic Data Commons (GDC) using the GDC Data Transfer Tool and REST API, supporting both open-access and controlled-access data.
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elastic-net-feature-selection
Use when selecting predictive genes or other molecular features from bulk expression matrices for binary case-vs-control classification with elastic net logistic regression, including coefficient path…
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china-sport-science
Use when targeting 《体育科学》(China Sport Science) — the China Sport Science Society flagship and top CSSCI sport-science journal (体育学). Apply to sport & exercise science spanning 运动人体科学 (生理/生化/生物力学/运动医学/…
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claim-strength-calibrator
Calibrates manuscript claim strength so wording matches the actual evidence level, study design, and validation status.
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convergence-study
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datadog-cli
Datadog CLI for searching logs, querying metrics, tracing requests, and managing dashboards. Use this when debugging production issues or working with Datadog observability.
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deg-screening-analysis
Use when screening differentially expressed genes from a bulk expression matrix between two user-specified groups, producing DEG tables, a volcano plot, and a clustered heatmap. Triggers include DEG a…
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differentiation-schemes
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download-geo
Download supplementary data files, series matrices, and raw FASTQ links from NCBI GEO for a given GSE series or GSM sample accession.
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esmfold2
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cibersort-immune-infiltration-analysis
Use when estimating relative immune cell infiltration from a bulk expression matrix with a CIBERSORT-style nu-SVR deconvolution workflow based on an LM22 signature matrix, comparing one case group aga…
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compute-env-setup
Set up a compute environment on a remote provider so Claude Science jobs can run there. Covers direct SSH/conda hosts, Slurm clusters, container-via-bridge runners, and managed-API providers (Modal, G…
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cover-letter-drafter
Drafts journal-ready cover letters for manuscript submission. Use when preparing a submission package, communicating the manuscript's contributions and journal fit to editors, or tailoring the novelty…
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decision-curve-analysis
Use when evaluating the clinical utility of a binary prediction model from a single clinical CSV file by fitting a logistic decision-curve model, plotting decision and clinical-impact curves, and expo…
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diagnostic-study-quality-assessment-quadas
Analyzes clinical diagnostic accuracy studies for bias using the QUADAS-2 tool. Use when Claude needs to assess the quality, risk of bias, or applicability of diagnostic accuracy studies (e.g., \"Asse…
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discussion-composer
Composes a Discussion around key findings, mechanisms, clinical relevance, and limitations. Use when writing or improving a Discussion section for any biomedical manuscript — including interpreting re…
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download-sra
Download raw sequencing data from NCBI SRA as FASTQ files using prefetch and fasterq-dump, with support for single accessions, batch lists, and BioProject expansion.
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estimate-immune-score-analysis
Use this skill to compute ESTIMATE immune-related microenvironment scores from a bulk expression matrix, generate an ESTIMATE score heatmap, and optionally generate group-wise ESTIMATE score boxplots …
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