introduction-logic-builder
Builds background-gap-objective logic for biomedical manuscript introductions with clear study positioning and disciplined narrative structure.
把 Skill 的源码、资源快照、README、包体和安装信号放进一个可搜索、可筛选的公开目录。
Builds background-gap-objective logic for biomedical manuscript introductions with clear study positioning and disciplined narrative structure.
Converts existing manuscript content into LaTeX format aligned with a target journal, conference, or template while preserving manuscript meaning and structural integrity.
Acknowledges limitations in sample, design, measurement, and validation in a professional way that improves credibility without undermining the whole paper. Use when writing the limitations paragraph …
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Functional annotation of metagenomic data using HUMAnN 3 for pathway abundance, Prokka for gene prediction, and eggNOG-mapper for ortholog assignment.
Turns your protocol and analysis workflow into publication-ready Methods text. Use when writing or revising the Methods section of a biomedical manuscript, ensuring it complies with reporting guidelin…
Query NCBI Entrez databases through official E-utilities with deterministic search, summary, fetch, link, and history workflows.
Writes the full Introduction section of a biomedical manuscript based on an approved or sufficiently clear study logic, while preserving evidence boundaries and introduction discipline.
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Meta-analysis frameworks and methods for mediation studies
De novo assembly of metagenomic contigs from short reads using MEGAHIT or metaSPAdes.
Remove host-derived reads from metagenomic samples by aligning to a host reference genome and extracting unmapped pairs.
Local-only qualitative analysis for interviews, field notes, focus groups, and mixed text material.
Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on…
Perform pre-experiment calculations and generate step-by-step preparation protocols for dilutions, solution preparation, dissolution, and % concentrations when planning formulations and lab prep workf…
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Register a model service in the managed family — a local model server container the daemon starts/stops on demand, or a remote upstream model API (https). Read the runbook, allocate a port (local only…
Improves medical English precision without changing the underlying facts, evidence boundaries, or intended scientific meaning.
Recover metagenome-assembled genomes (MAGs) from contigs using MetaBAT2, refine with DAS Tool, and assess quality with CheckM2.
Profile microbial community composition from shotgun metagenomic reads using Kraken2/Bracken or MetaPhlAn 4.
Educational GPT implementation in ~300 lines. Reproduces GPT-2 (124M) on OpenWebText. Clean, hackable code for learning transformers. By Andrej Karpathy. Perfect for understanding GPT architecture fro…
Raw read quality assessment with FastQC and multi-sample report aggregation with MultiQC.